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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs1783842 chr11:117919431 G/A 9.8E-6 489 37.7 38.65 31.5 KM Plot
KIRC rs180685697 chr2:67532511 G/A 1.88E-7 505 37.18 37.73 2.03 KM Plot
KIRC rs180791621 chr15:24430701 A/T 2.04E-8 502 37.53 32.7 3.3 KM Plot
KIRC rs181569486 chr2:67587032 C/T 2.23E-7 506 37.37 37.73 2.03 KM Plot
KIRC rs182107462 chr6:34993029 A/C 0 503 37.53 37.03 1.43 KM Plot
KIRC rs185569070 chr11:34783189 C/G 1.02E-7 502 37.67 33.35 3.3 KM Plot
KIRC rs186253609 chr15:24453447 C/T 1.75E-8 501 37.47 33.7 3.3 KM Plot
KIRC rs1881498 chr11:1531247 A/G 8.08E-5 509 5.47 37.37 37.47 KM Plot
KIRC rs1881499 chr11:1536758 A/G 8.08E-5 509 5.47 37.37 37.47 KM Plot
KIRC rs1881503 chr11:1507731 A/G 8.3E-5 509 5.47 37.6 37.18 KM Plot
KIRC rs188558913 chr2:67586984 A/G 2.23E-7 506 37.37 37.73 2.03 KM Plot
KIRC rs188830061 chr16:2953292 T/C 1.48E-5 497 37.03 39.23 9.37 KM Plot
KIRC rs1892251 chr6:25769349 T/C 1.77E-9 495 3.37 36.13 37.7 KM Plot
KIRC rs1892253 chr6:25782314 G/T 0.000129 509 37.73 36.87 6.8 KM Plot
KIRC rs1900808 chr8:92369781 C/A 1.4E-6 497 38 26.27 3.67 KM Plot